Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812182.1_cds_XP_016497037.1_11200
CDS Infomation

[gene=LOC107815902] [db_xref=GeneID:107815902] [protein=IRK-interacting protein-like] [protein_id=XP_016497037.1] [location=7335..8750] [gbkey=CDS]
Sequence

ATGCCAGTAGAAATGGAAGGAACAACAAAACCTCCACAAATTTCTGATATGTTTCACAAA
TTCGCCCATGTTGTCCGTACCAAAACCTTCGAACTCTTCGCCGATGAAACCGGCGAGGAA
AACACCTCCAACTCCACTGATGTCTTCACTCTGTTCAACTCCGCTGAGGAATTCATCCCT
AATCAAAAAGTCGTCGTTATAAAACCCGATTTCTGCAAATTCCCAGAAAATGAAAATACC
CATTTTACTAAATCCCTAATTTCTTCACTTTTTGCTACAATTTCGTCCTTTGAAGCTTCT
TATCTTCAGTTGCAAACAGCTCACGTGCCGTTCGACGAAAAAGCGATCGAATCAGCTGAT
AAAGTTTTGGTATCAGTTCTTCAGAAATTAACTGAAATGAAGAATTTGTATAAGGATTTT
AGGAAAAACCCAAGTTGTAATTTTGATGAATTTGTAGGGTCGGAATTGGAATTTCAGGTT
CAAGAAAATCAGAGCAAGCTCAGAGTTTTGGAGACTATGGTAAATCAGTTAATGTCTTTT
ATGGATTCTAAGGATGATGAAGTTTTGATTTTGAGGAAAAAAATGGAAAAATTGGAACTT
TTTAATTTCAATTTGTCAAAAAAATTAGGGGTCAAAAATGAAAATTTGGAGAATACCGGT
ACGAAGGTATTGTGTACAGTTACTGTTTTTGAATCTATGTTGCGCGATTCGATTAAGTTA
GTGAATAAATTTTGTAAGTTGTTAATGGAGTTGATGAAAAGAGCAGGTTGGGATTTGGAG
AAAGCAGCAAATTCTGTGTATTCTGATGTTAATTATGCTGAAAAAGGACAGTTTAAGTAT
GCGTTTATTTCGTATATTTGTTTGGGCATGTTTAAGGGCTTTGATCTTGAAGATTTTGGT
TTGTGTGATGAAGAAATGTTGTGTAATAGTGATGGTTTAATGTCTGGTGAAAATGATTAT
TTGAAACAATTACTTGAGCATGTTTCATGTAATCCGATGGAGGTTTTAAGTAAGAATCCT
AATTGTGCGTTTTCAAGATTTTGCGAGAAGAAGTATGAGCAGATAATTCATCCTACAATA
GAGTCGTCGATTTTTAGAAATTTGGATGGGAAAGAAGTCATAGTGGATTCTTGGAAGTCG
TTAAGTGTGTTTTACGAGTTGTTTGTAAGGATAGCAAGTGCGATATGGTTGCTTCATAAG
TTGGCCTATTCCTTTAATCCTGTAGTCGAGATATTCCAAGTCGAGAGAGGGGTTGACTTT
TCGATGGTGTACATGGAAGATGTTTCGAGGAAAAGTCAATTCCCTTTGAGCAAGACGAGG
CCAAAGGTGGGATTTACCGTCGTACCTGGATTTAAAATTGGGAGGACGATCATTCAGACA
CAGGTTTATCTTACTGGCTTAAAATGCACGGAATAG

Peptide Sequence

PEP ID

XP_016497037.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MPVEMEGTTKPPQISDMFHKFAHVVRTKTFELFADETGEENTSNSTDVFTLFNSAEEFIP
NQKVVVIKPDFCKFPENENTHFTKSLISSLFATISSFEASYLQLQTAHVPFDEKAIESAD
KVLVSVLQKLTEMKNLYKDFRKNPSCNFDEFVGSELEFQVQENQSKLRVLETMVNQLMSF
MDSKDDEVLILRKKMEKLELFNFNLSKKLGVKNENLENTGTKVLCTVTVFESMLRDSIKL
VNKFCKLLMELMKRAGWDLEKAANSVYSDVNYAEKGQFKYAFISYICLGMFKGFDLEDFG
LCDEEMLCNSDGLMSGENDYLKQLLEHVSCNPMEVLSKNPNCAFSRFCEKKYEQIIHPTI
ESSIFRNLDGKEVIVDSWKSLSVFYELFVRIASAIWLLHKLAYSFNPVVEIFQVERGVDF
SMVYMEDVSRKSQFPLSKTRPKVGFTVVPGFKIGRTIIQTQVYLTGLKCTE

Transcript Sequence

Gene sequence data has not been registered.